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bsbdenovo-qc [2017/11/21 12:24]
telatina
bsbdenovo-qc [2017/11/21 12:25] (current)
telatina
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 ===== Try yourself: Illumina MiSeq ===== ===== Try yourself: Illumina MiSeq =====
 Illumina MiSeq data is very common for bacterial genomes. Try performing the QC, saving it to a folder like ''​~/​web/​MiSeq_QC''​ so that you'll be able to actually see the output from the web. Illumina MiSeq data is very common for bacterial genomes. Try performing the QC, saving it to a folder like ''​~/​web/​MiSeq_QC''​ so that you'll be able to actually see the output from the web.
 +Being paired ends, you'll find two files, not just one:
 +  - /​bsb/​denovo/​datasets/​illumina/​DRR075740_1.fastq
 +  - /​bsb/​denovo/​datasets/​illumina/​DRR075740_2.fastq