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bsbdenovo-n50 [2017/11/15 01:36]
telatina
bsbdenovo-n50 [2017/11/28 12:07] (current)
telatina
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 ====== Measure contigs N50 ====== ====== Measure contigs N50 ======
  
-We counted the reads in our dataset using ''​seqkit stats''​. There is a special option (''​--all''​) to ask to calculate also the N50:+We counted the reads in our dataset using ''​seqkit stats''​. There is a special option (''​--all''​, two minuses, see below) to ask to calculate also the N50:
  
 <code bash> <code bash>