Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
bsbdenovo-datasets2 [2017/11/21 11:13]
telatina
bsbdenovo-datasets2 [2017/11/21 11:32] (current)
telatina
Line 53: Line 53:
 </​code>​ </​code>​
 We can use the ''​-S''​ parameter to avoid word wrap, and keep the sequences in one line (use left/right arrows to scroll). We can use the ''​-S''​ parameter to avoid word wrap, and keep the sequences in one line (use left/right arrows to scroll).
 +
 +==== Where does this data comes from? ====
 +Most datasets have been downloaded from the [[https://​www.ncbi.nlm.nih.gov/​sra|NCBI Short Reads Archive]], and they keep their Accession ID as filename. This means that you can search the SRA for the Accession, that in most cases is a single sequencing from a project and in the 454 case is the accession of an [[https://​www.ncbi.nlm.nih.gov/​sra/?​term=SRP001673|entire project]].
 +